Monday, July 12, 2010

Q & A with Prof. Paola Rizzoli

Photo by Ed Quinn.
At the last WHOI Commencement, MIT Prof. Paola Rizzoli was thanked for her many contributions to the Joint Program.  In recognition of her service, Jim Yoder announced the creation of the Paola Rizzoli Fellowship to be awarded each year to an incoming first year Joint Program student with preference given to a student who identifies initial co-advisers at both MIT and WHOI.

Given the ongoing discussion about how to strengthen the Joint Program, I thought it would be useful to find out a little about Paola's history of involvement, and to get her opinions about how the program might be improved.  To that end, she graciously agreed to answer a few questions via e-mail:

You have just stepped down from your position as the Director of the Joint Program at MIT after 12 years of service. How did you first become involved with the Joint Program, and how has your involvement changed over the years?

When I came to MIT in 1981, all the students in oceanography were enrolled in the Joint Program, the only way for a student to get an education and degree in oceanography (all disciplines) was to apply to the Joint Program, even though technically the two Institutions, MIT and WHOI, could issue separate degrees. It was therefore natural for any new professor in oceanography to become actively involved in the Program for getting students and teaching.

Also, a fundamental motivation was the interaction with the WHOI colleagues fostered by common research interests which very often led to co-advising a student. I became immediately involved both in advising and teaching and over the years I have taught all the core courses in PO, more than once, plus other courses I designed myself on topics related to my research.

In the 90's a parallel program was created at MIT, PAOC (Program in Amosphere, Oceans and Climate ) which can give an MIT-only degree in Oceanography. PAOC at first was competitive with the JP and created considerable friction between the two Institutions (see Review Committee report of 1998). Over the years, however, the coexistence of the two Programs smoothed out; presently the JP students in Physical and Chemical Oceanography are automatically part of PAOC and basically all the PO and CO students are enrolled in the JP.

Over the years my involvement extended to the programmatic aspects of the program. I became a member of JCPO in the early 90's, and was its chair in the period 1995-1997. At that time, we restructured the PO curriculum and general exam. And finally in 1997 I became MIT Director of the entire Program. So you could say that I have spent my entire professional life at MIT (30 years in 2011....) in the Program.

How has the Joint Program changed since you first became involved?

The organizational structure is basically the same, centered around five Committees, one for each oceanographic sub-discipline. At MIT, the line "of command" changed over the years. In 1997 I was reporting to David Litster, I do not even remember which was his exact position, and he was completely indifferent to the Program. Then, when the position of the Chancellor was created, I reported to him, and Larry Bacow was the first high level governance official at MIT to pay serious attention to the Program. Then the Provost Bob Brown became very strong supporter of the JP (in 2004, at the time of the second review, Bob described the program as "a jewel in the crown of graduate studies at MIT"). Under Bob my "boss" became the Associate Provost for Research and Education, and the present one, Claude Canizares, is also a great supporter of the Program.

This has been really a great change at MIT over 12 years. From the point of view of research and interests of the faculty of the two Institutions, there was unfortunately a drift apart between the two which has been recognized and is presently being addressed.

Indeed a recent review of the the Joint Program advised that we need to reinvigorate the connection between MIT and WHOI. Why do you think the connection has withered? What one thing might we do to help revitalize it?

There are a variety of reasons why the connection between MIT and WHOI withered and they are mostly discipline-related. For example, in geophysics, at MIT we lost a number of key faculty members, such as Sean Solomon and Marcha McNutt, who had been deeply involved in the JP. They were not replaced until the recent, vigorous hiring by Maria Zuber of new young faculty in all disciplines. Thus the ties in geophysics suffered greatly by these losses. Hopefully the new geophysics MIT faculty will establish vigorous ties with the WHOI faculty.

In PO and CO the reason was due to the drift apart of the research interests of the two faculties, especially in PO (see the creation of PAOC). At MIT we evolved very strongly to climate research, which is by nature multidisciplinary and interdisciplinary. WHOI was rather resistant to such an evolution until recently. WHOI recognized the importance of such a change from more traditional oceanography by hiring as Director Susan Avery, an atmospheric and climate scientist. As Susan recalled at the June 5 commencement at WHOI, we had lunch together in Summer 2008 just a few months after she took over, and we talked about restructuring the Program towards climate oriented research. And recently WHOI has been looking for new hires in climate. The restructuring of the JP is occurring now in response to the last review report.

Another issue highlighted in the external review is the perception that students face too many hurdles if they want to undertake interdisciplinary studies in the Joint Program. Do you think that perception is correct? If so, do you think we can (or should) do something to facilitate interdisciplinary studies?

That perception was correct until recently, but the situation is changing. I will give you the PO example. Even though on paper there were three or four interdisciplinary curricula available to the students, the general exam in PO was, and is, still structured around GFD questions, even though we adjust them in the case of a student working at interdisciplinary research. The PO faculty has amply recognized this rigidity and a committee has been created and is presently working at restructuring the PO curriculum and general exam to reflect the importance of interdisciplinary studies.

The need of restructuring the entire JP, as recommended by the review committee, has been addressed through the creation by Susan Avery and Ed Boyle, of a Committee comprising MIT/WHOI faculty in all the disciplines. This restructuring process will also hopefully address the need of reinvigorating the ties between the two Institutions by creating new venues of interactions at the research and teaching/advising levels.

Is there anything you would like to say current students?

You are in one of the two top educational programs in oceanography in the world, and the only one which joins together a top sea-going institution and the top school in science and technology in the world. Take full advantage of the wide-ranging opportunities that each Institution offers; don't be shy in your ambitions. Reach out to the joint faculty: they are there to work with you and will only be delighted to help you in your research and to achieve your career goals.

Tuesday, June 22, 2010

Tyack on TEDTalks

Many of us in the Biology Department participate in educational activities outside of the Institution. One such activity is to deliver a lecture for a public audience.  Unfortunately, those of us back home in Woods Hole rarely have the opportunity to see, hear, and learn from those presentations.

That's why I was delighted when Hal Caswell pointed me to a lecture that Peter Tyack gave recently as part of the TEDTalks series (posted below).  After you've watched Peter's lecture, I recommend checking out other TED talks, they are great for procrastinating!

Thursday, June 10, 2010

2010 Commencement Ceremonies

Biology Department participants in the 2010 Commencement Ceremonies included Erin Banning (first from left), Kate Buckman (fourth), Annette Hynes (fifth), and Liz Orchard (seventh). (Photo by Jayne Doucette, WHOI.)

Commencement ceremonies honoring graduates from the MIT/WHOI Joint Program who earned their degrees between February 2006 and June 2010 were held at McKee Ball Field in Woods Hole on Saturday, June 5. An early-morning deluge threatened to dampen the participants, if not their spirits, but the sun broke through just in time to keep all but their feet dry.

The 2010 graduates in Biological Oceanography included:
  • Elizabeth Orchard, Ph.D., Phosphorus Physiology of the Marine Cyanobacterium Trichodesmium,
  • Sarah Pacocha Preheim, Ph.D., Ecology and Population Structure of Vibrionaceae in the Coastal Ocean,
  • Kelly Rakow Sutherland, Ph.D., Form, Function and Flow in the Plankton: Jet Propulsion and Filtration by Pelagic Tunicates,
  • Erin Banning, Ph.D., Biology and Potential Biogeochemical Impacts of Novel Predatory Flavobacteria, and
  • Holly Moeller, M.S., On the Economic Optimality of Marine Reserves When Fishing Damages Habitat.
Other honors bestowed at the ceremonies included the Ruth and Paul Fye Awards for Best Graduate Student Papers to: 
  • Michael Brosnahan in the category of Biological Oceanography for his 2010 paper, "Outbreeding lethality between toxic Group I and nontoxic Group III Alexandrium tamarense spp. isolates: Predominance of heterotypic encystment and implications for mating interactions and biogeography," [Deep-Sea Research II, 57:175-189], and to
  • Gareth Lawson in the Interdisciplinary Papers category for his 2008 two paper set "Euphausiid distribution along the Western Antarctic Peninsula—Part A: Development of robust multi-frequency acoustic techniques to identify euphausiid aggregations and quantify euphausiid size, abundance, and biomass," [Deep-Sea Research II, 55:412-431], and "Euphausiid distribution along the Western Antarctic Peninsula—Part B: Distribution of euphausiid aggregations and biomass, and associations with environmental features," [Deep-Sea Research II, 55:432-454].
(In addition to their Fye Awards, Gareth and Mike were nominated for "Papers with the Longest Titles" awards.)

Congratulations to all the graduates and honorees, and special thanks to everyone in the Academic Programs Office who helped to make this splendid quinquennial celebration so enjoyable!
From left: Mark Hahn, Joy Lapseritis, Kristen Whalen, Michael Neubert and Larry Madin. (Photo by Jayne Doucette, WHOI.)

Thursday, June 3, 2010

2010-2011 Topics Courses

JCBO has approved the following Topics Courses for the 2010-211 academic year:
Fall
  • 7.431 Topics in Marine Ecology: The Biology and Ecology of Coastal Ecosystems in Tropical Oceans (Tarrant, Pineda, Thorrold)
  • 7.430 Topics in Quantitative Marine Science: Dynamic Models in Biology (Neubert)
Spring
  • 7.438 Topics in the Behavior of Marine Animals: Marine Animal Behavior (Sayigh)
  • 7.433 Topics in Biological Oceanography: Historical Developments in Biological Oceanography (Lawson, Sosik)
I'm still trying to figure out how to post the descriptions of these courses.  In the meantime, I'm sure the instructors will be happy to answer questions about them.  I'm also pretty sure that the instructors (particularly those teaching this Fall) would be happy to hear from students who are interested in taking the class. This will give them a sense of how many students they may have and help them with course scheduling.

Friday, May 21, 2010

Hahn, Tivey win Arnold B. Aarons Award

Please join me in congratulating the Biology Department's own Senior Scientist Dr. Mark Hahn for winning the Arnold B. Aarons Award for excellence in teaching, advising and mentoring.  Dr. Margaret ("Meg") Tivey, Senior Scientist in Marine Chemistry and Geochemistry, will also be a recipient this year. The awards will be presented at the WHOI graduation ceremony on Saturday, June 5. Mark and Meg join previous awardees Dr. Joe Pedlosky (Physical Oceanography) and Dr. Lauren Mullineaux (Biology).

I think I speak for all of us on the Scientific Staff who have worked with Mark during his tenure as the Biology Department's Education Coordinator or in his capacity as the Chair of JCBO, that we (and our students!) have always valued his advice and guidance on all matters educational.  In my opinion, the Award Committee couldn't have found another mensch more deserving of the honor.

Congratulations Mark!

Thursday, April 29, 2010

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Monday, March 8, 2010

Award Nominations: Arnold B. Arons Award for Excellence in Teaching, Advising, and Mentoring

This Award was established by the Woods Hole Oceanographic Institution to honor the memory of Dr. Arnold B. Arons, long serving Trustee and Honorary Trustee of Woods Hole Oceanographic Institution.


The Arnold B. Arons Award will be conferred periodically every two to five years as circumstances warrant to a WHOI Scientific Staff or Senior Technical Staff member who has demonstrated any or all of the following qualities during his/her participation in the education programs of the Institution:

  • Sustained excellence in teaching.
  • Sustained excellence in advising and/or mentoring.
  • Exceptional promise in teaching, advising, or mentoring during early career involvement in the Institution’s education programs.

The Award will consist of a plaque engraved with the recipient’s name and a cash award. The recipient’s name will be engraved along with the date of receipt of the Award on a large plaque to be displayed in an appropriate manner in the Institution.


All members of the WHOI Scientific Staff and Senior Technical Staff (Research Specialists, Information System Specialists, Senior Engineers, Senior Research Specialists, Senior Information Systems Specialists and Principal Engineers), with the exception of the members of the Award Committee, are eligible for the award.


Nominations may be submitted by any WHOI employee, MIT/WHOI Joint Program student, WHOI postdoctoral appointee, MIT/WHOI Joint Program or WHOI alumni/ae. The Award Committee requests that nominations consist of:

  1. A one or two page letter that addresses how the nominee’s activities at WHOI have fulfilled one or more of the award’s criteria (see above).
  2. A full C.V. of the nominee that includes education activities such as teaching, advising, mentoring, and committee memberships both at WHOI and elsewhere.
  3. Three letters of support for the nomination of one to two pages each. At least two of these letters should be from present or former WHOI employees, students, JP alumni/ae, or postdoctoral appointees.

All of the above documents should be sent to the Arnold Arons Award Committee c/o James Yoder, Vice President for Academic Programs and Dean, MS #31. Nominations are due by April 16, 2010. Questions about the award and nomination procedure should be directed to James Yoder (jyoder@whoi.edu) or Associate Dean James Price (jprice@whoi.edu).


The Award Committee will deliberate during late April and early May and will forward its recommendation to Dr. Susan Avery, WHOI President and Director, for her approval. The award will be presented at the Academic Convocation and Commencement to be held June 5, 2010 at WHOI.

Award Nominations: Ruth and Paul Fye Awards for Best Graduate Student Papers

On the occasion of Paul M. Fye's retirement as Director of the Woods Hole Oceanographic Institution and in special recognition of his and Ruth Fye's personal interest in the graduate program and students, the employees of the Institution established an endowed fund through personal contributions to support an award for the best graduate student paper. The process of selections has evolved to presenting the award every five or six years for the best paper by a graduate student in each of the five subdisciplines of the Joint Program, as well as an award for an interdisciplinary paper.


An eligible paper is one that has been published in press or submitted between February 1, 2005 and January 31, 2010, and is based on work performed while the author was a student in the WHOI or MIT/WHOI Joint Graduate Program. For example, if a recent graduate submits a paper for consideration, it cannot be based on work performed since graduating. Likewise, a paper based primarily on work performed prior to entering the program would not be eligible.


Papers for consideration should be submitted no later than April 16, 2010 to the appropriate J. Seward Johnson Chair/Education Coordinator. Nominations for best interdisciplinary should be sent to Dr. Jim Price (jprice@whoi.edu).


Each J. Seward Johnson Chair/Education Coordinator at WHOI will form a review committee of three persons that will determine the awardee in their subdiscipline. The winner of the Ruth and Paul Fye Award for Excellence in Oceanographic Research will be presented with a check for $500 and a recognition certificate. As part of the Academic Convocation and Commencement to be held on June 5, 2010 at WHOI, an award will be conferred in each of the five sub-disciplines of the Joint Program.



Tuesday, November 24, 2009

Thank You

As I recover from Thanksgiving overindulgence, I'd like to take a few moments to thank all of the people who have helped to keep the Biology education programs running this year. Had I compiled this list last year many of the names would have been the same, but many would have been different too. It really is a group effort. So...

Thank you to the staff of the Academic Programs Office at WHOI, particularly Christine Charette, Marsha Gomes, and Julia Westwater, and to Ronni Schwartz at MIT, who keep the gears of the program well-oiled. Their quick, pleasant, and affirmative responses to my frequent requests for help make my job much easier.

Thank you to the members of JCBO---Ed DeLong, Dianne Newman, Martin Polz, Heidi Sosik and Simon Thorrold---who work hard to make sure that all the students in Biological Oceanography have the opportunity to complete their Ph.D. and flourish as independent scientists. (Students, these people really do "have your back.")

Thank you to Lauren Mullineaux and Ann Tarant, who last year as the members of the Admissions Committee read through many (many) files of worthy applicants, saw the best in them all, and helped JCBO make very tough decisions. I also thank them for agreeing to help again this year!

Thank you to Sonya Dyhrman and Gareth Lawson for their service on the Summer Student Fellowship Admissions Committee and Becky Gast for her service on the Postdoctoral Scholar Committee. There are so many good applicants for both programs, and so few fellowships.

Thank you to Mark Baumgartner, Hal Caswell, Mark Hahn, Mike Fogarty, Darlene Ketten, Tracy Mincer, Michael Moore, Lauren Mullineaux, Jesus Pineda, Peter Tyack, Simon Thorrold, Laela Sayigh, and Stefan Sievert, for teaching courses this past year.

Thank you to the 2009 Comprehensive Exam Committee, Cabell Davis, Stefan Sievert, Ann Tarant, and Janelle Thompson, and to all who contributed questions. It's not easy to write challenging yet fair exam questions, but they seem to do it.

Thanks again to Shuhei Ono, Tanja Bosak, Roger Summons, Ed Boyle, and Maria Zuber for finding desk space for our students over in EAPS.

I hope I haven't forgotten anyone; my apologies in advance if I have. I hope you all had a happy Thanksgiving. Hope to see you at the Holiday Party!

Tuesday, November 17, 2009

Student Accomplishments

Many of our students are recognized for their scientific ideas and accomplishments. We celebrate these in our individual labs, but I think that many of us are unaware of what the students in other labs have achieved. (I certainly was.) Here's a sample:

Michael Brosnahan, who is advised by Don Anderson, won an Outstanding Student Poster Award at the 2009 Gordon Research Conference on Mycotoxins and Phycotoxins. He was also asked to present a "Hot Topics" seminar.







Carter Esch won a North Pacific Research Board Graduate Student Research award to fund passive acoustic monitoring work she will be doing in the Bering Strait. Carter is advised by Mark Baumgartner.







Kelton McMahon won the Sally Richardson Award for the best student presentation at the 33rd Annual Larval Fish Conference. He also won the best student paper award at the 4th International Otolith Symposium for his paper “Stable Carbon Isotope Analysis of Amino Acids in Otolith Protein: A New Tool for Tracking Fish Movement” (M. Fogel, T. Elsdon, I. Mataeo, and S. Thorrold coauthors). Kelton is advised by Simon Thorrold.



Congratulations to Mike, Carter, and Kelton. If you know of any accomplishments of other students, please let me know so that I can properly announce their achievements here.

Monday, November 9, 2009

Old Exams Posted

I found a pile of old comprehensive exams on my desk. (Sometimes things get lost there.) I've posted them in the "Links" section. They come from various years between 1988 and 1996, and include at least one exam from the "megacourse." In addition to their use as fodder for students studying for the comprehensive exam, they also provide a snapshot of what we as a department thought was important for biological oceanographers to know 20 years ago. Is that material still important now? Take a look and decide for yourself.

Thursday, October 29, 2009

New Faces

Please welcome the incoming class of 2009:

Amalia Aruda, a former summer student fellow, was an undergraduate at Georgetown University. She will be studying under the supervision of Ann Tarrant.









Skylar Bayer, also an SSF alumna, studied at Brown University as an undergraduate. She will be advised by Lauren Mullineaux.










Kristen Hunter-Cevera earned two bachelor's degrees and her MBA at West Virginia University. Heidi Sosik and I are her co-advisors.










Santiago Herrera-Monroy studied at the Universidad de los Andes, in Colombia. Tim Shank is his advisor.










Amalia, Skylar, Kristen and Santiago are all taking classes up in Cambridge this semester. If you see them there or in Woods Hole, please introduce yourself!

Tuesday, October 27, 2009

2010 Admissions Schedule

It finally feels like autumn has set in. Before you know it we'll be up to our knees in leaves...and applications to the Joint Program. This year we are trying out an electronic system. Hopefully it will make it easier for potential advisors to review files and will also save on paper. (Keep your fingers crossed.) Thanks in advance to Ann Tarrant and Lauren Mullineaux who will be helping me to evaluate the applications.

Here is this year's admissions schedule (mark your calendars!):

Jan 5: application deadline
Jan 12: application files available to review
Jan 26: first cut (to ~15 files)
Jan 29: Biology Department meeting to match files with advisors
and determine available support and cut list to ~10 files
Feb 11: WHOI Admissions Advisory Committee meeting
(a.k.a. the "pizza meeting")
Feb 12: JCBO meeting
Feb 19: Joint Program Committee meeting (final admissions decisions)
Feb 19: Begin notifying admitted applicants

Open House will be held March 15-16.

Friday, September 4, 2009

Joint Program External Review Report

The report of the external committee that reviewed the Joint Program has arrived. Please read it. Once the semester settles down, I will hold a meeting with the students to see if the report accurately reflects their sentiments. I will also schedule a time to discuss the report with the Scientific Staff. In the meantime, comments are always welcome here on the blog.

Friday, July 31, 2009

2009-2010 Topics Course Offerings

Thank you to all of the faculty who have offered to teach the following Topics Courses this academic year:

Fall 2009
  • Topics in marine mammal science (Tyack et al.)
  • Adaptive dynamics and evolutionary explanation (Caswell)
  • Functional analysis of microbial communities (Mincer, Sievert)
Spring 2010
  • Algal genomics (Dyhrman)
  • Oceans and human health (Gast, Moore)
  • Evolution (Shank)
Please contact the instructors of the Fall courses soon if you plan to take their course. This will help them gauge interest and allow them, to the extent possible, to work out any scheduling issues.

Tuesday, June 16, 2009

Comprehensive Exam Complete (Phew!)

Congratulations to about-to-be-third-year students Ann Allen, Jamie Becker, Elizabeth Halliday, Kathryn Kauffman, Meredith White, and Maya Yamato. They've all just passed their qualifying exam with flying colors. Here's the exam they took. [I've omitted the questions that were written for individual students by their advisors.]

Joint Program External Review

The External Review Committee for the Joint Program has now completed their visit. Thank you to all who participated by providing me with data or meeting with the committee.

In preparation for the review, Jim Price prepared an overview of the Joint Program to provide some background for the Committee. I thought this document might be interesting (maybe even useful) for everyone, but especially for those of you students and staff who are new to the institution. Here it is.

I've also posted the presentation that I gave to the Committee here. [See if you can catch the embarrassing typo!] Without the narrative to go along with the slides some of them may not seem to have much context. I'll do my best to answer any questions you might have.

During the course of the review, it became clear to me that we (the WHOI Biology Department) do not have a shared vision of what the Joint Program in Biological Oceanography is, and what it should be. I hope we can have a discussion soon after we have the Review Committee's report.

Monday, June 1, 2009

Microbial sequence data workshop

The Center for Microbial Oceanography: Research and Education (C-MORE) is offering a workshop on the phylogenetic analyses of nucleotide sequences from microorganisms.  The workshop will be held July 29 – 30, 2009, at WHOI.  For more information follow this link: /WHOI_ARB_workshop.pdf.

Thursday, May 28, 2009

New Handbook

A new version of the Handbook for Students and Advisors in the MIT/WHOI Joint Program in Biological Oceanography has been approved by JCBO. (There is a link to it in the "Links" section at right). 

Important updates include:
  • changes to course requirements (which have been in effect for 2 years now);
  • a description of the new comprehensive exam structure;
  • links to Joint Program documents and web pages;
  • extension request deadlines.
This new version represents a relatively major revision.  I strongly encourage all students and advisors to read it.  If you find that something is missing, confusing, or incorrect.  Please let me know. 

Saturday, May 9, 2009

Updates

It has been too long since my last post.  My apologies. Since admissions season ended, time seems to have gotten away from me! So, here's an update on various topics:
  • Admissions: The rate of application to the Joint Program in Biological Oceanography continues to increase.  This year we had nearly 100 applicants.  From those candidates we admitted seven; of those four accepted.  They are: Amalia Aruda (to be advised by Ann Tarrant), Santiago Herrera (to be advised by Tim Shank), Nicholas Macfarlane (to be advised by Peter Tyack), and Kristen Hunter-Cevera (to be advised by Heidi Sosik and me). Nicholas Macfarlane deferred his enrollment until 2010.  Skylar Bayer (to be advised by Lauren Mullineaux) was admitted in 2008, and will be enrolling this year, bringing the size of the entering class of 2009 to four.
  • Mentoring:  I have received a few receipts for spring lunches between students and their peer mentors.  If you haven't had your lunch yet, please get together with your mentor soon.  (Remember the $25 limit.)  Also, I'll be looking for four new post-generals mentors for the incoming class.
  • External Review: Once every five years the Joint Program undergoes a review by an external committee.  The next review will take place in June.  I'll hold a meeting with the students soon to find out if there is anything of which they think we should make the committee aware.  I hope to hear the opinions of the faculty at an upcoming Scientific Staff meeting.   I welcome any thoughts from all of you.
  • Topics Courses:  I recently mailed a solicitation for 2009-2010 Topics Course proposals to the Biology Department Scientific Staff and others.  Students, this is your opportunity to recruit someone to organize a Topics Course on a subject about which you'd like to learn more.